Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.37□□□□□ -0.59
GdnfP48540 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
GdnfP48540 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.37□□□□□ -0.59
GdnfP48540 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
GdnfP48540 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Gm24420-201ENSMUST00000176676 59 ntBASIC11.37□□□□□ -0.59
GdnfP48540 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Gm42612-201ENSMUST00000197986 623 ntBASIC11.37□□□□□ -0.59
GdnfP48540 Gm43170-201ENSMUST00000199827 612 ntBASIC11.37□□□□□ -0.59
GdnfP48540 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
GdnfP48540 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Gm5425-201ENSMUST00000214125 459 ntBASIC11.37□□□□□ -0.59
GdnfP48540 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.37□□□□□ -0.59
GdnfP48540 CT009764.1-201ENSMUST00000222260 483 ntBASIC11.37□□□□□ -0.59
GdnfP48540 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.37□□□□□ -0.59
GdnfP48540 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.37□□□□□ -0.59
GdnfP48540 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.37□□□□□ -0.59
GdnfP48540 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GdnfP48540 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
GdnfP48540 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.36□□□□□ -0.59
GdnfP48540 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
GdnfP48540 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
GdnfP48540 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.36□□□□□ -0.59
GdnfP48540 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.36□□□□□ -0.59
GdnfP48540 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Gm28760-201ENSMUST00000185995 736 ntBASIC11.36□□□□□ -0.59
GdnfP48540 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
GdnfP48540 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Gm18905-201ENSMUST00000205454 928 ntBASIC11.36□□□□□ -0.59
GdnfP48540 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
GdnfP48540 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
GdnfP48540 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.36□□□□□ -0.59
GdnfP48540 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
GdnfP48540 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
GdnfP48540 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
GdnfP48540 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
GdnfP48540 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
GdnfP48540 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms