Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Gm8396-201ENSMUST00000057361 823 ntBASIC12.13□□□□□ -0.47
Sox2P48432 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox2P48432 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox2P48432 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox2P48432 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox2P48432 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.12□□□□□ -0.47
Sox2P48432 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.12□□□□□ -0.47
Sox2P48432 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sox2P48432 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.12□□□□□ -0.47
Sox2P48432 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Gm13453-201ENSMUST00000118708 357 ntBASIC12.12□□□□□ -0.47
Sox2P48432 Gm15376-201ENSMUST00000122258 783 ntBASIC12.12□□□□□ -0.47
Sox2P48432 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.12□□□□□ -0.47
Sox2P48432 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox2P48432 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox2P48432 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox2P48432 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox2P48432 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.11□□□□□ -0.47
Sox2P48432 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox2P48432 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Sox2P48432 Gm13223-201ENSMUST00000118609 747 ntBASIC12.11□□□□□ -0.47
Sox2P48432 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Sox2P48432 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.11□□□□□ -0.47
Sox2P48432 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Gm43094-201ENSMUST00000196549 921 ntBASIC12.11□□□□□ -0.47
Sox2P48432 Gm43514-201ENSMUST00000198852 424 ntBASIC12.11□□□□□ -0.47
Sox2P48432 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Sox2P48432 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.11□□□□□ -0.47
Sox2P48432 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox2P48432 Gm9063-201ENSMUST00000223299 582 ntBASIC12.11□□□□□ -0.47
Sox2P48432 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.11□□□□□ -0.47
Sox2P48432 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sox2P48432 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.11□□□□□ -0.47
Sox2P48432 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms