Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Gm14381-201ENSMUST00000122105 414 ntBASIC12.25□□□□□ -0.45
Nkx2-6P43688 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Gm2991-201ENSMUST00000173338 480 ntBASIC12.25□□□□□ -0.45
Nkx2-6P43688 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.25□□□□□ -0.45
Nkx2-6P43688 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Gm6334-201ENSMUST00000207083 228 ntBASIC12.25□□□□□ -0.45
Nkx2-6P43688 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Gm32025-201ENSMUST00000217960 307 ntBASIC12.25□□□□□ -0.45
Nkx2-6P43688 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.25□□□□□ -0.45
Nkx2-6P43688 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.25□□□□□ -0.45
Nkx2-6P43688 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.25□□□□□ -0.45
Nkx2-6P43688 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.24□□□□□ -0.45
Nkx2-6P43688 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Mir877-201ENSMUST00000104738 85 ntBASIC12.24□□□□□ -0.45
Nkx2-6P43688 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Gm25668-201ENSMUST00000157700 129 ntBASIC12.24□□□□□ -0.45
Nkx2-6P43688 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Gm20482-202ENSMUST00000174729 825 ntBASIC12.24□□□□□ -0.45
Nkx2-6P43688 Gm22121-201ENSMUST00000175148 54 ntBASIC12.24□□□□□ -0.45
Nkx2-6P43688 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.24□□□□□ -0.45
Nkx2-6P43688 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Gm24526-201ENSMUST00000082921 158 ntBASIC12.24□□□□□ -0.45
Nkx2-6P43688 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-6P43688 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.23□□□□□ -0.45
Nkx2-6P43688 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Snord83b-201ENSMUST00000104546 94 ntBASIC12.23□□□□□ -0.45
Nkx2-6P43688 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms