Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.5□□□□□ -0.41
Tnfsf4P43488 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.5□□□□□ -0.41
Tnfsf4P43488 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf4P43488 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tnfsf4P43488 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.49□□□□□ -0.41
Tnfsf4P43488 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.49□□□□□ -0.41
Tnfsf4P43488 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Mir7023-201ENSMUST00000185093 64 ntBASIC12.49□□□□□ -0.41
Tnfsf4P43488 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.49□□□□□ -0.41
Tnfsf4P43488 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.49□□□□□ -0.41
Tnfsf4P43488 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.49□□□□□ -0.41
Tnfsf4P43488 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Gm6983-201ENSMUST00000214912 628 ntBASIC12.48□□□□□ -0.41
Tnfsf4P43488 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.48□□□□□ -0.41
Tnfsf4P43488 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.48□□□□□ -0.41
Tnfsf4P43488 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.48□□□□□ -0.41
Tnfsf4P43488 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms