Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.9□□□□□ -0.34
Nckap1P28660 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nckap1P28660 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nckap1P28660 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.9□□□□□ -0.34
Nckap1P28660 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nckap1P28660 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Nckap1P28660 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.9□□□□□ -0.34
Nckap1P28660 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Mir7221-201ENSMUST00000184009 72 ntBASIC12.9□□□□□ -0.34
Nckap1P28660 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.9□□□□□ -0.34
Nckap1P28660 Gm5904-201ENSMUST00000210286 865 ntBASIC12.9□□□□□ -0.34
Nckap1P28660 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.9□□□□□ -0.34
Nckap1P28660 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.9□□□□□ -0.34
Nckap1P28660 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.9□□□□□ -0.34
Nckap1P28660 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.9□□□□□ -0.34
Nckap1P28660 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Nckap1P28660 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.9□□□□□ -0.34
Nckap1P28660 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nckap1P28660 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.89□□□□□ -0.35
Nckap1P28660 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.89□□□□□ -0.35
Nckap1P28660 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Nckap1P28660 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nckap1P28660 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Mir877-201ENSMUST00000104738 85 ntBASIC12.89□□□□□ -0.35
Nckap1P28660 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.89□□□□□ -0.35
Nckap1P28660 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.89□□□□□ -0.35
Nckap1P28660 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nckap1P28660 Gm20482-202ENSMUST00000174729 825 ntBASIC12.89□□□□□ -0.35
Nckap1P28660 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.89□□□□□ -0.35
Nckap1P28660 Gm4857-201ENSMUST00000192718 785 ntBASIC12.89□□□□□ -0.35
Nckap1P28660 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.89□□□□□ -0.35
Nckap1P28660 Morn2-202ENSMUST00000227729 656 ntBASIC12.89□□□□□ -0.35
Nckap1P28660 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nckap1P28660 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Gm24526-201ENSMUST00000082921 158 ntBASIC12.89□□□□□ -0.35
Nckap1P28660 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nckap1P28660 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.89□□□□□ -0.35
Nckap1P28660 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Nckap1P28660 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nckap1P28660 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nckap1P28660 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.88□□□□□ -0.35
Nckap1P28660 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Gm11222-201ENSMUST00000119005 738 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms