Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm14277-201ENSMUST00000121195 360 ntBASIC14.5□□□□□ -0.09
Col2a1P28481 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col2a1P28481 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Gm9022-201ENSMUST00000182482 992 ntBASIC14.5□□□□□ -0.09
Col2a1P28481 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.5□□□□□ -0.09
Col2a1P28481 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.5□□□□□ -0.09
Col2a1P28481 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.5□□□□□ -0.09
Col2a1P28481 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.5□□□□□ -0.09
Col2a1P28481 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col2a1P28481 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.49□□□□□ -0.09
Col2a1P28481 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col2a1P28481 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.49□□□□□ -0.09
Col2a1P28481 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.49□□□□□ -0.09
Col2a1P28481 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.49□□□□□ -0.09
Col2a1P28481 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col2a1P28481 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col2a1P28481 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col2a1P28481 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Col2a1P28481 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.49□□□□□ -0.09
Col2a1P28481 Gm17812-201ENSMUST00000204935 318 ntBASIC14.49□□□□□ -0.09
Col2a1P28481 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.49□□□□□ -0.09
Col2a1P28481 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.49□□□□□ -0.09
Col2a1P28481 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col2a1P28481 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Col2a1P28481 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.48□□□□□ -0.09
Col2a1P28481 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.48□□□□□ -0.09
Col2a1P28481 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.48□□□□□ -0.09
Col2a1P28481 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.48□□□□□ -0.09
Col2a1P28481 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.48□□□□□ -0.09
Col2a1P28481 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col2a1P28481 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col2a1P28481 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col2a1P28481 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.47□□□□□ -0.09
Col2a1P28481 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col2a1P28481 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.47□□□□□ -0.09
Col2a1P28481 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col2a1P28481 Mir6927-201ENSMUST00000184494 71 ntBASIC14.47□□□□□ -0.09
Col2a1P28481 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms