Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.98□□□□□ -0.49
Cd40lgP27548 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.98□□□□□ -0.49
Cd40lgP27548 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.98□□□□□ -0.49
Cd40lgP27548 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gm17150-201ENSMUST00000165577 381 ntBASIC11.98□□□□□ -0.49
Cd40lgP27548 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cd40lgP27548 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cd40lgP27548 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.98□□□□□ -0.49
Cd40lgP27548 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gm29649-201ENSMUST00000185649 419 ntBASIC11.98□□□□□ -0.49
Cd40lgP27548 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.98□□□□□ -0.49
Cd40lgP27548 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.98□□□□□ -0.49
Cd40lgP27548 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.98□□□□□ -0.49
Cd40lgP27548 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cd40lgP27548 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Cd40lgP27548 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cd40lgP27548 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.97□□□□□ -0.49
Cd40lgP27548 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.97□□□□□ -0.49
Cd40lgP27548 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
Cd40lgP27548 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cd40lgP27548 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.97□□□□□ -0.49
Cd40lgP27548 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cd40lgP27548 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.97□□□□□ -0.49
Cd40lgP27548 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Cd40lgP27548 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.97□□□□□ -0.49
Cd40lgP27548 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cd40lgP27548 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cd40lgP27548 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40lgP27548 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.97□□□□□ -0.49
Cd40lgP27548 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms