Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Snord83b-201ENSMUST00000104546 94 ntBASIC13.31□□□□□ -0.28
Nfkb1P25799 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.31□□□□□ -0.28
Nfkb1P25799 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Gm8738-201ENSMUST00000172606 329 ntBASIC13.31□□□□□ -0.28
Nfkb1P25799 Gm2991-201ENSMUST00000173338 480 ntBASIC13.31□□□□□ -0.28
Nfkb1P25799 Mospd4-201ENSMUST00000180618 576 ntBASIC13.31□□□□□ -0.28
Nfkb1P25799 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Gm37489-201ENSMUST00000191883 159 ntBASIC13.31□□□□□ -0.28
Nfkb1P25799 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.31□□□□□ -0.28
Nfkb1P25799 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Gm24526-201ENSMUST00000082921 158 ntBASIC13.31□□□□□ -0.28
Nfkb1P25799 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.31□□□□□ -0.28
Nfkb1P25799 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nfkb1P25799 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Nfkb1P25799 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Nfkb1P25799 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nfkb1P25799 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Nfkb1P25799 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.3□□□□□ -0.28
Nfkb1P25799 Gm13297-201ENSMUST00000120205 934 ntBASIC13.3□□□□□ -0.28
Nfkb1P25799 Gm14704-201ENSMUST00000120300 874 ntBASIC13.3□□□□□ -0.28
Nfkb1P25799 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.3□□□□□ -0.28
Nfkb1P25799 Gm24548-201ENSMUST00000158650 108 ntBASIC13.3□□□□□ -0.28
Nfkb1P25799 Gm22121-201ENSMUST00000175148 54 ntBASIC13.3□□□□□ -0.28
Nfkb1P25799 Gm6621-201ENSMUST00000193251 772 ntBASIC13.3□□□□□ -0.28
Nfkb1P25799 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.3□□□□□ -0.28
Nfkb1P25799 Gm7046-201ENSMUST00000221351 977 ntBASIC13.3□□□□□ -0.28
Nfkb1P25799 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nfkb1P25799 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nfkb1P25799 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nfkb1P25799 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nfkb1P25799 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nfkb1P25799 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nfkb1P25799 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.29□□□□□ -0.28
Nfkb1P25799 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nfkb1P25799 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Gm4986-201ENSMUST00000119731 549 ntBASIC13.29□□□□□ -0.28
Nfkb1P25799 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.29□□□□□ -0.28
Nfkb1P25799 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.29□□□□□ -0.28
Nfkb1P25799 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nfkb1P25799 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms