Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.21□□□□□ -0.45
TP20293 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.21□□□□□ -0.45
TP20293 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
TP20293 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Mir874-201ENSMUST00000104769 76 ntBASIC12.21□□□□□ -0.45
TP20293 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Gm11478-201ENSMUST00000117851 599 ntBASIC12.21□□□□□ -0.45
TP20293 Gm6447-201ENSMUST00000118905 835 ntBASIC12.21□□□□□ -0.45
TP20293 Gm11424-201ENSMUST00000121929 829 ntBASIC12.21□□□□□ -0.45
TP20293 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
TP20293 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.21□□□□□ -0.45
TP20293 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
TP20293 Gm5356-201ENSMUST00000093326 615 ntBASIC12.21□□□□□ -0.45
TP20293 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
TP20293 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TP20293 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TP20293 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TP20293 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TP20293 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TP20293 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TP20293 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TP20293 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
TP20293 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TP20293 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TP20293 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.2□□□□□ -0.46
TP20293 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.2□□□□□ -0.46
TP20293 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.2□□□□□ -0.46
TP20293 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.2□□□□□ -0.46
TP20293 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.2□□□□□ -0.46
TP20293 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.2□□□□□ -0.46
TP20293 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.2□□□□□ -0.46
TP20293 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.2□□□□□ -0.46
TP20293 Gm38671-201ENSMUST00000200573 130 ntBASIC12.2□□□□□ -0.46
TP20293 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TP20293 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.2□□□□□ -0.46
TP20293 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
TP20293 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
TP20293 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.19□□□□□ -0.46
TP20293 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TP20293 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms