Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Gm15321-201ENSMUST00000121290 288 ntBASIC11.64□□□□□ -0.55
Cd48P18181 Gm15376-201ENSMUST00000122258 783 ntBASIC11.64□□□□□ -0.55
Cd48P18181 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.64□□□□□ -0.55
Cd48P18181 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.64□□□□□ -0.55
Cd48P18181 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.64□□□□□ -0.55
Cd48P18181 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.64□□□□□ -0.55
Cd48P18181 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cd48P18181 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cd48P18181 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cd48P18181 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.64□□□□□ -0.55
Cd48P18181 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.64□□□□□ -0.55
Cd48P18181 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cd48P18181 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.64□□□□□ -0.55
Cd48P18181 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.64□□□□□ -0.55
Cd48P18181 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Cd48P18181 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.63□□□□□ -0.55
Cd48P18181 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd48P18181 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cd48P18181 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Gm22189-201ENSMUST00000103822 86 ntBASIC11.63□□□□□ -0.55
Cd48P18181 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Cd48P18181 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.63□□□□□ -0.55
Cd48P18181 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd48P18181 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.63□□□□□ -0.55
Cd48P18181 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.63□□□□□ -0.55
Cd48P18181 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.63□□□□□ -0.55
Cd48P18181 Gm26315-201ENSMUST00000083890 321 ntBASIC11.63□□□□□ -0.55
Cd48P18181 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cd48P18181 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.63□□□□□ -0.55
Cd48P18181 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd48P18181 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd48P18181 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd48P18181 Matn2-203ENSMUST00000226766 3252 ntBASIC11.62□□□□□ -0.55
Cd48P18181 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.62□□□□□ -0.55
Cd48P18181 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.62□□□□□ -0.55
Cd48P18181 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd48P18181 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.62□□□□□ -0.55
Cd48P18181 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.62□□□□□ -0.55
Cd48P18181 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd48P18181 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cd48P18181 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.62□□□□□ -0.55
Cd48P18181 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms