Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Gm6736-201ENSMUST00000166583 948 ntBASIC10.72□□□□□ -0.69
Cxcl1P12850 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.72□□□□□ -0.69
Cxcl1P12850 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl1P12850 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cxcl1P12850 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.71□□□□□ -0.69
Cxcl1P12850 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cxcl1P12850 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.71□□□□□ -0.69
Cxcl1P12850 Gm11978-201ENSMUST00000122315 466 ntBASIC10.71□□□□□ -0.69
Cxcl1P12850 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.71□□□□□ -0.69
Cxcl1P12850 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.71□□□□□ -0.69
Cxcl1P12850 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.71□□□□□ -0.69
Cxcl1P12850 Gm27702-201ENSMUST00000184512 56 ntBASIC10.71□□□□□ -0.69
Cxcl1P12850 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cxcl1P12850 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.71□□□□□ -0.69
Cxcl1P12850 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.71□□□□□ -0.69
Cxcl1P12850 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Gm20445-201ENSMUST00000061905 565 ntBASIC10.71□□□□□ -0.69
Cxcl1P12850 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl1P12850 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl1P12850 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl1P12850 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl1P12850 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl1P12850 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl1P12850 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl1P12850 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl1P12850 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cxcl1P12850 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.7□□□□□ -0.7
Cxcl1P12850 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.7□□□□□ -0.7
Cxcl1P12850 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.7□□□□□ -0.7
Cxcl1P12850 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.7□□□□□ -0.7
Cxcl1P12850 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl1P12850 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.7□□□□□ -0.7
Cxcl1P12850 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms