Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.68□□□□□ -0.22
Hoxc8P09025 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.68□□□□□ -0.22
Hoxc8P09025 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.68□□□□□ -0.22
Hoxc8P09025 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.68□□□□□ -0.22
Hoxc8P09025 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Hoxc8P09025 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc8P09025 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.67□□□□□ -0.22
Hoxc8P09025 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hoxc8P09025 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Hoxc8P09025 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc8P09025 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hoxc8P09025 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Hoxc8P09025 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.67□□□□□ -0.22
Hoxc8P09025 Gm18304-201ENSMUST00000189162 546 ntBASIC13.67□□□□□ -0.22
Hoxc8P09025 AU022133-201ENSMUST00000200601 873 ntBASIC13.67□□□□□ -0.22
Hoxc8P09025 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.67□□□□□ -0.22
Hoxc8P09025 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hoxc8P09025 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.67□□□□□ -0.22
Hoxc8P09025 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.67□□□□□ -0.22
Hoxc8P09025 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc8P09025 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.66□□□□□ -0.22
Hoxc8P09025 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Hoxc8P09025 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc8P09025 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.66□□□□□ -0.22
Hoxc8P09025 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.66□□□□□ -0.22
Hoxc8P09025 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.66□□□□□ -0.22
Hoxc8P09025 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.66□□□□□ -0.22
Hoxc8P09025 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.66□□□□□ -0.22
Hoxc8P09025 Rmrp-201ENSMUST00000157463 271 ntBASIC13.66□□□□□ -0.22
Hoxc8P09025 Gm5616-201ENSMUST00000165252 384 ntBASIC13.66□□□□□ -0.22
Hoxc8P09025 Gm8741-201ENSMUST00000174736 384 ntBASIC13.66□□□□□ -0.22
Hoxc8P09025 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hoxc8P09025 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.66□□□□□ -0.22
Hoxc8P09025 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.66□□□□□ -0.22
Hoxc8P09025 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.66□□□□□ -0.22
Hoxc8P09025 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms