Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.59■□□□□ 0.09
Col4a1P02463 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Col4a1P02463 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Col4a1P02463 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Col4a1P02463 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Col4a1P02463 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col4a1P02463 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col4a1P02463 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col4a1P02463 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col4a1P02463 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col4a1P02463 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col4a1P02463 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col4a1P02463 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Gm24934-201ENSMUST00000103764 111 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Gm8566-201ENSMUST00000120174 465 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.58■□□□□ 0.08
Col4a1P02463 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Col4a1P02463 Gm29615-201ENSMUST00000185371 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm28224-201ENSMUST00000186078 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm29001-201ENSMUST00000186177 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm28292-201ENSMUST00000186593 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm28101-201ENSMUST00000187608 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm29076-201ENSMUST00000187689 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm28302-201ENSMUST00000187931 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm28646-201ENSMUST00000188220 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm9230-201ENSMUST00000188228 532 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm28205-201ENSMUST00000189177 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm29032-201ENSMUST00000189797 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm28695-201ENSMUST00000190300 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm37448-201ENSMUST00000192795 697 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.58■□□□□ 0.08
Col4a1P02463 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.58■□□□□ 0.08
Col4a1P02463 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
Col4a1P02463 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.58■□□□□ 0.08
Col4a1P02463 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Col4a1P02463 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Col4a1P02463 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Col4a1P02463 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Col4a1P02463 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Col4a1P02463 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Col4a1P02463 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col4a1P02463 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.57■□□□□ 0.08
Col4a1P02463 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col4a1P02463 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.57■□□□□ 0.08
Col4a1P02463 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col4a1P02463 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.57■□□□□ 0.08
Col4a1P02463 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC15.57■□□□□ 0.08
Col4a1P02463 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.57■□□□□ 0.08
Col4a1P02463 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.57■□□□□ 0.08
Col4a1P02463 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.57■□□□□ 0.08
Col4a1P02463 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Col4a1P02463 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.57■□□□□ 0.08
Col4a1P02463 Gm11667-201ENSMUST00000119828 486 ntBASIC15.57■□□□□ 0.08
Col4a1P02463 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col4a1P02463 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.57■□□□□ 0.08
Col4a1P02463 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.57■□□□□ 0.08
Col4a1P02463 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.57■□□□□ 0.08
Col4a1P02463 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col4a1P02463 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms