Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vti1aO89116 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.98□□□□□ -0.17
Vti1aO89116 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.98□□□□□ -0.17
Vti1aO89116 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Gm4857-201ENSMUST00000192718 785 ntBASIC13.98□□□□□ -0.17
Vti1aO89116 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.98□□□□□ -0.17
Vti1aO89116 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.98□□□□□ -0.17
Vti1aO89116 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1aO89116 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vti1aO89116 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vti1aO89116 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.97□□□□□ -0.17
Vti1aO89116 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.97□□□□□ -0.17
Vti1aO89116 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.97□□□□□ -0.17
Vti1aO89116 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.97□□□□□ -0.17
Vti1aO89116 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vti1aO89116 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.97□□□□□ -0.17
Vti1aO89116 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.97□□□□□ -0.17
Vti1aO89116 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.97□□□□□ -0.17
Vti1aO89116 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Mir877-201ENSMUST00000104738 85 ntBASIC13.97□□□□□ -0.17
Vti1aO89116 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vti1aO89116 Gm2991-201ENSMUST00000173338 480 ntBASIC13.97□□□□□ -0.17
Vti1aO89116 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vti1aO89116 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Gm6222-202ENSMUST00000182143 629 ntBASIC13.97□□□□□ -0.17
Vti1aO89116 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.97□□□□□ -0.17
Vti1aO89116 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.97□□□□□ -0.17
Vti1aO89116 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.97□□□□□ -0.17
Vti1aO89116 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.97□□□□□ -0.17
Vti1aO89116 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vti1aO89116 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Vti1aO89116 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vti1aO89116 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vti1aO89116 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1aO89116 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.96□□□□□ -0.17
Vti1aO89116 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.96□□□□□ -0.17
Vti1aO89116 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Vti1aO89116 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.96□□□□□ -0.17
Vti1aO89116 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.96□□□□□ -0.17
Vti1aO89116 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vti1aO89116 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vti1aO89116 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vti1aO89116 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vti1aO89116 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vti1aO89116 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vti1aO89116 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.96□□□□□ -0.17
Vti1aO89116 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms