Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.72□□□□□ -0.37
ClppO88696 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.71□□□□□ -0.37
ClppO88696 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ClppO88696 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.71□□□□□ -0.37
ClppO88696 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.71□□□□□ -0.37
ClppO88696 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.71□□□□□ -0.37
ClppO88696 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ClppO88696 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.71□□□□□ -0.37
ClppO88696 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.71□□□□□ -0.37
ClppO88696 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.71□□□□□ -0.37
ClppO88696 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
ClppO88696 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.71□□□□□ -0.37
ClppO88696 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClppO88696 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClppO88696 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ClppO88696 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClppO88696 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.71□□□□□ -0.38
ClppO88696 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.71□□□□□ -0.38
ClppO88696 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ClppO88696 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClppO88696 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClppO88696 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClppO88696 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ClppO88696 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.7□□□□□ -0.38
ClppO88696 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ClppO88696 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.7□□□□□ -0.38
ClppO88696 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Gm5187-201ENSMUST00000117317 991 ntBASIC12.7□□□□□ -0.38
ClppO88696 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.7□□□□□ -0.38
ClppO88696 Gm26927-201ENSMUST00000182385 965 ntBASIC12.7□□□□□ -0.38
ClppO88696 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.7□□□□□ -0.38
ClppO88696 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.7□□□□□ -0.38
ClppO88696 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.7□□□□□ -0.38
ClppO88696 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ClppO88696 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ClppO88696 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ClppO88696 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.7□□□□□ -0.38
ClppO88696 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClppO88696 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ClppO88696 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ClppO88696 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ClppO88696 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.69□□□□□ -0.38
ClppO88696 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ClppO88696 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms