Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm13035-201ENSMUST00000117496 342 ntBASIC16.47■□□□□ 0.23
Ubr1O70481 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.47■□□□□ 0.23
Ubr1O70481 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC16.47■□□□□ 0.23
Ubr1O70481 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.47■□□□□ 0.23
Ubr1O70481 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ubr1O70481 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Ubr1O70481 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Gm8199-201ENSMUST00000121323 823 ntBASIC16.46■□□□□ 0.23
Ubr1O70481 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.46■□□□□ 0.23
Ubr1O70481 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC16.46■□□□□ 0.23
Ubr1O70481 Gm18304-201ENSMUST00000189162 546 ntBASIC16.46■□□□□ 0.23
Ubr1O70481 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC16.46■□□□□ 0.23
Ubr1O70481 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Gm26035-201ENSMUST00000083065 308 ntBASIC16.46■□□□□ 0.23
Ubr1O70481 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC16.46■□□□□ 0.23
Ubr1O70481 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ubr1O70481 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.46■□□□□ 0.23
Ubr1O70481 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr1O70481 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC16.46■□□□□ 0.22
Ubr1O70481 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.46■□□□□ 0.22
Ubr1O70481 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ubr1O70481 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ubr1O70481 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.46■□□□□ 0.22
Ubr1O70481 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ubr1O70481 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ubr1O70481 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Ubr1O70481 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Ubr1O70481 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.45■□□□□ 0.22
Ubr1O70481 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ubr1O70481 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Ubr1O70481 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Ubr1O70481 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr1O70481 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ubr1O70481 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Ubr1O70481 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.44■□□□□ 0.22
Ubr1O70481 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.44■□□□□ 0.22
Ubr1O70481 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC16.44■□□□□ 0.22
Ubr1O70481 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.44■□□□□ 0.22
Ubr1O70481 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Ubr1O70481 Gm18038-201ENSMUST00000197900 485 ntBASIC16.44■□□□□ 0.22
Ubr1O70481 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.44■□□□□ 0.22
Ubr1O70481 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.44■□□□□ 0.22
Ubr1O70481 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms