Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Pde6dO55057 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.21□□□□□ -0.77
Pde6dO55057 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Pde6dO55057 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Pde6dO55057 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Pde6dO55057 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Gm17968-201ENSMUST00000194902 784 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.21□□□□□ -0.77
Pde6dO55057 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.21□□□□□ -0.77
Pde6dO55057 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Pde6dO55057 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pde6dO55057 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pde6dO55057 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pde6dO55057 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pde6dO55057 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Pde6dO55057 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pde6dO55057 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pde6dO55057 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.21□□□□□ -0.78
Pde6dO55057 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pde6dO55057 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Pde6dO55057 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.21□□□□□ -0.78
Pde6dO55057 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Pde6dO55057 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.21□□□□□ -0.78
Pde6dO55057 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pde6dO55057 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pde6dO55057 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pde6dO55057 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.2□□□□□ -0.78
Pde6dO55057 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pde6dO55057 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pde6dO55057 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.2□□□□□ -0.78
Pde6dO55057 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pde6dO55057 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.2□□□□□ -0.78
Pde6dO55057 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.2□□□□□ -0.78
Pde6dO55057 Gm6912-201ENSMUST00000117218 544 ntBASIC10.2□□□□□ -0.78
Pde6dO55057 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.2□□□□□ -0.78
Pde6dO55057 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Pde6dO55057 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.2□□□□□ -0.78
Pde6dO55057 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Pde6dO55057 Gm18057-201ENSMUST00000208220 503 ntBASIC10.2□□□□□ -0.78
Pde6dO55057 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.2□□□□□ -0.78
Pde6dO55057 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Pde6dO55057 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.2□□□□□ -0.78
Pde6dO55057 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.2□□□□□ -0.78
Pde6dO55057 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Pde6dO55057 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.2□□□□□ -0.78
Pde6dO55057 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Pde6dO55057 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pde6dO55057 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.2□□□□□ -0.78
Pde6dO55057 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pde6dO55057 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pde6dO55057 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pde6dO55057 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.19□□□□□ -0.78
Pde6dO55057 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pde6dO55057 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pde6dO55057 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pde6dO55057 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pde6dO55057 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.19□□□□□ -0.78
Pde6dO55057 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms