Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.05□□□□□ -0.16
Clk2O35491 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.05□□□□□ -0.16
Clk2O35491 Gm5904-201ENSMUST00000210286 865 ntBASIC14.05□□□□□ -0.16
Clk2O35491 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.05□□□□□ -0.16
Clk2O35491 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.05□□□□□ -0.16
Clk2O35491 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Clk2O35491 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clk2O35491 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.05□□□□□ -0.16
Clk2O35491 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clk2O35491 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk2O35491 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.05□□□□□ -0.16
Clk2O35491 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.04□□□□□ -0.16
Clk2O35491 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Clk2O35491 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.04□□□□□ -0.16
Clk2O35491 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.04□□□□□ -0.16
Clk2O35491 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Gm22058-201ENSMUST00000083393 310 ntBASIC14.04□□□□□ -0.16
Clk2O35491 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.04□□□□□ -0.16
Clk2O35491 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.04□□□□□ -0.16
Clk2O35491 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Clk2O35491 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Clk2O35491 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clk2O35491 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.04□□□□□ -0.16
Clk2O35491 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Clk2O35491 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.03□□□□□ -0.16
Clk2O35491 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.03□□□□□ -0.16
Clk2O35491 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.03□□□□□ -0.16
Clk2O35491 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.03□□□□□ -0.16
Clk2O35491 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Clk2O35491 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.03□□□□□ -0.16
Clk2O35491 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clk2O35491 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clk2O35491 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Clk2O35491 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clk2O35491 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clk2O35491 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clk2O35491 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clk2O35491 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clk2O35491 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.02□□□□□ -0.17
Clk2O35491 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk2O35491 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Clk2O35491 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.02□□□□□ -0.17
Clk2O35491 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.02□□□□□ -0.17
Clk2O35491 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Clk2O35491 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Clk2O35491 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms