Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.96□□□□□ -0.65
Cpsf4lE9Q2N0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cpsf4lE9Q2N0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Cpsf4lE9Q2N0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4lE9Q2N0 Gm40466-201ENSMUST00000212174 422 ntBASIC10.96□□□□□ -0.65
Cpsf4lE9Q2N0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4lE9Q2N0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.96□□□□□ -0.65
Cpsf4lE9Q2N0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4lE9Q2N0 Gm19163-201ENSMUST00000223313 780 ntBASIC10.96□□□□□ -0.65
Cpsf4lE9Q2N0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.96□□□□□ -0.65
Cpsf4lE9Q2N0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4lE9Q2N0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Snord83b-201ENSMUST00000104546 94 ntBASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Gm22121-201ENSMUST00000175148 54 ntBASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Gm26927-201ENSMUST00000182385 965 ntBASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Gm10268-201ENSMUST00000085340 555 ntBASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4lE9Q2N0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.94□□□□□ -0.66
Cpsf4lE9Q2N0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms