Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.61□□□□□ -0.55
Shank1D3YZU1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.61□□□□□ -0.55
Shank1D3YZU1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.6□□□□□ -0.55
Shank1D3YZU1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.6□□□□□ -0.55
Shank1D3YZU1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Gm18734-201ENSMUST00000172937 808 ntBASIC11.6□□□□□ -0.55
Shank1D3YZU1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Gm6458-201ENSMUST00000211573 635 ntBASIC11.6□□□□□ -0.55
Shank1D3YZU1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.6□□□□□ -0.55
Shank1D3YZU1 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.6□□□□□ -0.55
Shank1D3YZU1 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shank1D3YZU1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.6□□□□□ -0.55
Shank1D3YZU1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.6□□□□□ -0.55
Shank1D3YZU1 Gm44405-201ENSMUST00000198952 126 ntBASIC11.6□□□□□ -0.55
Shank1D3YZU1 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.6□□□□□ -0.55
Shank1D3YZU1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.59□□□□□ -0.55
Shank1D3YZU1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gm15547-201ENSMUST00000122152 333 ntBASIC11.59□□□□□ -0.55
Shank1D3YZU1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gm2546-201ENSMUST00000182630 991 ntBASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.59□□□□□ -0.55
Shank1D3YZU1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shank1D3YZU1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Shank1D3YZU1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Shank1D3YZU1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.58□□□□□ -0.56
Shank1D3YZU1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms