Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Gm7774-201ENSMUST00000200064 533 ntBASIC14.8□□□□□ -0.04
Syce3B5KM66 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Syce3B5KM66 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.8□□□□□ -0.04
Syce3B5KM66 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Syce3B5KM66 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Syce3B5KM66 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Syce3B5KM66 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syce3B5KM66 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Syce3B5KM66 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Syce3B5KM66 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.79□□□□□ -0.04
Syce3B5KM66 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Syce3B5KM66 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Syce3B5KM66 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.79□□□□□ -0.04
Syce3B5KM66 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.79□□□□□ -0.04
Syce3B5KM66 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.79□□□□□ -0.04
Syce3B5KM66 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Gm5161-201ENSMUST00000075243 853 ntBASIC14.79□□□□□ -0.04
Syce3B5KM66 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.79□□□□□ -0.04
Syce3B5KM66 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Syce3B5KM66 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syce3B5KM66 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Syce3B5KM66 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.78□□□□□ -0.04
Syce3B5KM66 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.78□□□□□ -0.04
Syce3B5KM66 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Syce3B5KM66 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.78□□□□□ -0.04
Syce3B5KM66 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.78□□□□□ -0.04
Syce3B5KM66 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.78□□□□□ -0.04
Syce3B5KM66 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.78□□□□□ -0.04
Syce3B5KM66 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Syce3B5KM66 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syce3B5KM66 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Syce3B5KM66 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Syce3B5KM66 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Syce3B5KM66 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.77□□□□□ -0.04
Syce3B5KM66 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.77□□□□□ -0.04
Syce3B5KM66 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syce3B5KM66 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Syce3B5KM66 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.77□□□□□ -0.05
Syce3B5KM66 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms