Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn7aB1AYL1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn7aB1AYL1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn7aB1AYL1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn7aB1AYL1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn7aB1AYL1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Gm42682-201ENSMUST00000198349 1265 ntBASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Gm43916-201ENSMUST00000205062 967 ntBASIC16.31■□□□□ 0.2
Scn7aB1AYL1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn7aB1AYL1 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Gm23596-201ENSMUST00000104304 132 ntBASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Gm9550-201ENSMUST00000161130 862 ntBASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Gm4482-201ENSMUST00000200876 742 ntBASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Gm9072-201ENSMUST00000218390 1514 ntBASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Gm10179-201ENSMUST00000086233 688 ntBASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Gm25881-201ENSMUST00000157783 103 ntBASIC16.3■□□□□ 0.2
Scn7aB1AYL1 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn7aB1AYL1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Gm1821-202ENSMUST00000227415 750 ntBASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn7aB1AYL1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Gm6580-201ENSMUST00000117504 1357 ntBASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Gm7722-201ENSMUST00000120646 741 ntBASIC16.28■□□□□ 0.2
Scn7aB1AYL1 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Gm8365-201ENSMUST00000197334 648 ntBASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Gm42997-202ENSMUST00000200321 985 ntBASIC16.28■□□□□ 0.2
Scn7aB1AYL1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms