Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Gm10752-201ENSMUST00000218348 729 ntBASIC10.92□□□□□ -0.66
Col6a4A2AX52 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.92□□□□□ -0.66
Col6a4A2AX52 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Gm9540-201ENSMUST00000188230 478 ntBASIC10.92□□□□□ -0.66
Col6a4A2AX52 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.92□□□□□ -0.66
Col6a4A2AX52 Gm45224-201ENSMUST00000208203 414 ntBASIC10.92□□□□□ -0.66
Col6a4A2AX52 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.92□□□□□ -0.66
Col6a4A2AX52 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.92□□□□□ -0.66
Col6a4A2AX52 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a4A2AX52 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm25214-201ENSMUST00000104573 129 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm27046-201ENSMUST00000182160 463 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm11531-201ENSMUST00000117614 555 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.91□□□□□ -0.66
Col6a4A2AX52 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a4A2AX52 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms