Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Gm13829-201ENSMUST00000119600 138 ntBASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Gm8099-201ENSMUST00000200510 742 ntBASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atg4a-psA0A0G2JFS9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.71■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm13226-201ENSMUST00000117838 404 ntBASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm14660-201ENSMUST00000119809 575 ntBASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm14921-201ENSMUST00000118643 908 ntBASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm23363-201ENSMUST00000175024 79 ntBASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm18187-201ENSMUST00000196476 984 ntBASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms