Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpxQ9JHS4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpxQ9JHS4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpxQ9JHS4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpxQ9JHS4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpxQ9JHS4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpxQ9JHS4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpxQ9JHS4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ClpxQ9JHS4 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpxQ9JHS4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ClpxQ9JHS4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ClpxQ9JHS4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Gm24420-201ENSMUST00000176676 59 ntBASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Gm29667-201ENSMUST00000190817 490 ntBASIC11.89□□□□□ -0.51
ClpxQ9JHS4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpxQ9JHS4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpxQ9JHS4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.87□□□□□ -0.51
ClpxQ9JHS4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpxQ9JHS4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpxQ9JHS4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.87□□□□□ -0.51
ClpxQ9JHS4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpxQ9JHS4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpxQ9JHS4 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.87□□□□□ -0.51
ClpxQ9JHS4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms