Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.8□□□□□ -0.36
OtofQ9ESF1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gm14921-201ENSMUST00000118643 908 ntBASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
OtofQ9ESF1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Gm15547-201ENSMUST00000122152 333 ntBASIC12.79□□□□□ -0.36
OtofQ9ESF1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Mir6927-201ENSMUST00000184494 71 ntBASIC12.79□□□□□ -0.36
OtofQ9ESF1 Gm37466-201ENSMUST00000195692 652 ntBASIC12.79□□□□□ -0.36
OtofQ9ESF1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.79□□□□□ -0.36
OtofQ9ESF1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
OtofQ9ESF1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Gm13813-201ENSMUST00000120998 787 ntBASIC12.78□□□□□ -0.36
OtofQ9ESF1 Gm13570-201ENSMUST00000140763 309 ntBASIC12.78□□□□□ -0.36
OtofQ9ESF1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Gm44405-201ENSMUST00000198952 126 ntBASIC12.78□□□□□ -0.36
OtofQ9ESF1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.78□□□□□ -0.36
OtofQ9ESF1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
OtofQ9ESF1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms