Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm12165-201ENSMUST00000117047 342 ntBASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm15711-201ENSMUST00000118889 535 ntBASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm13045-201ENSMUST00000119019 712 ntBASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm14999-201ENSMUST00000121039 624 ntBASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm14832-201ENSMUST00000121289 322 ntBASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm27627-201ENSMUST00000183644 150 ntBASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm7600-201ENSMUST00000209657 785 ntBASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-4Q9EQM3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Gm5369-201ENSMUST00000217499 588 ntBASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-4Q9EQM3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-4Q9EQM3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms