Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm11803-201ENSMUST00000119966 444 ntBASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Gm6745-201ENSMUST00000199216 526 ntBASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.5□□□□□ -0.25
Cpne8Q9DC53 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.5□□□□□ -0.25
Cpne8Q9DC53 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.5□□□□□ -0.25
Cpne8Q9DC53 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.5□□□□□ -0.25
Cpne8Q9DC53 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Gm8810-201ENSMUST00000172895 754 ntBASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Gm38671-201ENSMUST00000200573 130 ntBASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpne8Q9DC53 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms