Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp8Q9DB85 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp8Q9DB85 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp8Q9DB85 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.7□□□□□ -0.38
Rrp8Q9DB85 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp8Q9DB85 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rrp8Q9DB85 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp8Q9DB85 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp8Q9DB85 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rrp8Q9DB85 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp8Q9DB85 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Gm11439-201ENSMUST00000118598 409 ntBASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Gm27341-201ENSMUST00000183570 106 ntBASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp8Q9DB85 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Gm23363-201ENSMUST00000175024 79 ntBASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Gm22058-201ENSMUST00000083393 310 ntBASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp8Q9DB85 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Gm25214-201ENSMUST00000104573 129 ntBASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Gm14028-201ENSMUST00000117434 479 ntBASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Gm13665-201ENSMUST00000120830 528 ntBASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Gm22902-201ENSMUST00000158488 302 ntBASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Gm3096-201ENSMUST00000185770 364 ntBASIC12.67□□□□□ -0.38
Rrp8Q9DB85 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.67□□□□□ -0.38
Rrp8Q9DB85 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms