Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lonrf3Q9D4H7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Gm15198-201ENSMUST00000117283 177 ntBASIC15.03■□□□□ -0
Lonrf3Q9D4H7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Mir8109-201ENSMUST00000184375 117 ntBASIC15.03■□□□□ -0
Lonrf3Q9D4H7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lonrf3Q9D4H7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Snord83b-201ENSMUST00000104546 94 ntBASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Gm14704-201ENSMUST00000120300 874 ntBASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Gm43118-201ENSMUST00000199149 775 ntBASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Gm4768-201ENSMUST00000206199 686 ntBASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lonrf3Q9D4H7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lonrf3Q9D4H7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Gm3890-201ENSMUST00000182416 207 ntBASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Gm19931-201ENSMUST00000198920 368 ntBASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Gm6013-201ENSMUST00000212264 699 ntBASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Lonrf3Q9D4H7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms