Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.29□□□□□ -0.44
Upk1aQ9D132 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.29□□□□□ -0.44
Upk1aQ9D132 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Gm21854-201ENSMUST00000179901 471 ntBASIC12.29□□□□□ -0.44
Upk1aQ9D132 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.29□□□□□ -0.44
Upk1aQ9D132 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.29□□□□□ -0.44
Upk1aQ9D132 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.28□□□□□ -0.44
Upk1aQ9D132 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.28□□□□□ -0.44
Upk1aQ9D132 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Gm27989-201ENSMUST00000184721 107 ntBASIC12.28□□□□□ -0.44
Upk1aQ9D132 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Upk1aQ9D132 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.28□□□□□ -0.44
Upk1aQ9D132 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk1aQ9D132 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk1aQ9D132 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk1aQ9D132 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk1aQ9D132 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk1aQ9D132 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk1aQ9D132 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk1aQ9D132 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk1aQ9D132 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Upk1aQ9D132 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.27□□□□□ -0.45
Upk1aQ9D132 Gm29667-201ENSMUST00000190817 490 ntBASIC12.27□□□□□ -0.45
Upk1aQ9D132 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.27□□□□□ -0.45
Upk1aQ9D132 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.27□□□□□ -0.45
Upk1aQ9D132 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.27□□□□□ -0.45
Upk1aQ9D132 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk1aQ9D132 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms