Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnaseh2aQ9CWY8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Mt1-202ENSMUST00000211807 1085 ntBASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm3318-201ENSMUST00000217604 1183 ntBASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm13809-201ENSMUST00000117921 597 ntBASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Mir1956-201ENSMUST00000157748 65 ntBASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm43962-201ENSMUST00000203898 190 ntBASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnaseh2aQ9CWY8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rnaseh2aQ9CWY8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnaseh2aQ9CWY8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnaseh2aQ9CWY8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rnaseh2aQ9CWY8 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 1608.9 ms