Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim33Q99PP7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.92□□□□□ -0.34
Trim33Q99PP7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Gm13899-201ENSMUST00000121519 1255 ntBASIC12.92□□□□□ -0.34
Trim33Q99PP7 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.92□□□□□ -0.34
Trim33Q99PP7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Gm5745-201ENSMUST00000183748 313 ntBASIC12.92□□□□□ -0.34
Trim33Q99PP7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.92□□□□□ -0.34
Trim33Q99PP7 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.92□□□□□ -0.34
Trim33Q99PP7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.92□□□□□ -0.34
Trim33Q99PP7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Trim33Q99PP7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.91□□□□□ -0.34
Trim33Q99PP7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.91□□□□□ -0.34
Trim33Q99PP7 Gm5035-201ENSMUST00000215581 927 ntBASIC12.91□□□□□ -0.34
Trim33Q99PP7 Gm17794-201ENSMUST00000220252 955 ntBASIC12.91□□□□□ -0.34
Trim33Q99PP7 Gm8598-201ENSMUST00000221184 836 ntBASIC12.91□□□□□ -0.34
Trim33Q99PP7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim33Q99PP7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms