Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gtf2ird2Q99NI3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2ird2Q99NI3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2ird2Q99NI3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2ird2Q99NI3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2ird2Q99NI3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gtf2ird2Q99NI3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2ird2Q99NI3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2ird2Q99NI3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Mir686-201ENSMUST00000102174 109 ntBASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Mir1938-201ENSMUST00000158746 100 ntBASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Gm43630-201ENSMUST00000201550 776 ntBASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2ird2Q99NI3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Gm4768-201ENSMUST00000206199 686 ntBASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Gm10478-201ENSMUST00000084451 396 ntBASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2ird2Q99NI3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gtf2ird2Q99NI3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
Gtf2ird2Q99NI3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.27
Gtf2ird2Q99NI3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gtf2ird2Q99NI3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gtf2ird2Q99NI3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gtf2ird2Q99NI3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gtf2ird2Q99NI3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.33□□□□□ -0.28
Gtf2ird2Q99NI3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.33□□□□□ -0.28
Gtf2ird2Q99NI3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gtf2ird2Q99NI3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gtf2ird2Q99NI3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.33□□□□□ -0.28
Gtf2ird2Q99NI3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gtf2ird2Q99NI3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms