Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.65□□□□□ -0.38
Msh4Q99MT2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.65□□□□□ -0.38
Msh4Q99MT2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Itm2b-204ENSMUST00000228637 783 ntBASIC12.65□□□□□ -0.38
Msh4Q99MT2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.65□□□□□ -0.38
Msh4Q99MT2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Msh4Q99MT2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.65□□□□□ -0.39
Msh4Q99MT2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Msh4Q99MT2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
Msh4Q99MT2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Msh4Q99MT2 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.64□□□□□ -0.39
Msh4Q99MT2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.64□□□□□ -0.39
Msh4Q99MT2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Gm12390-201ENSMUST00000117897 397 ntBASIC12.64□□□□□ -0.39
Msh4Q99MT2 Gm5687-201ENSMUST00000118252 640 ntBASIC12.64□□□□□ -0.39
Msh4Q99MT2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.64□□□□□ -0.39
Msh4Q99MT2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msh4Q99MT2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.63□□□□□ -0.39
Msh4Q99MT2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Gm8598-201ENSMUST00000221184 836 ntBASIC12.63□□□□□ -0.39
Msh4Q99MT2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.63□□□□□ -0.39
Msh4Q99MT2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msh4Q99MT2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms