Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.24□□□□□ -0.45
Nkd1Q99MH6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkd1Q99MH6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Gm26315-201ENSMUST00000083890 321 ntBASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms