Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Gm15429-201ENSMUST00000151268 798 ntBASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Gm26315-201ENSMUST00000083890 321 ntBASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp1b1Q99LU0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Gm15678-201ENSMUST00000117573 960 ntBASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Gm12490-201ENSMUST00000120255 560 ntBASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Mir7654-201ENSMUST00000185082 70 ntBASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Gm9908-201ENSMUST00000211534 448 ntBASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Gm7653-201ENSMUST00000214567 508 ntBASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Gm5186-201ENSMUST00000218781 920 ntBASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Gm6180-201ENSMUST00000065243 498 ntBASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chmp1b1Q99LU0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp1b1Q99LU0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp1b1Q99LU0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp1b1Q99LU0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp1b1Q99LU0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp1b1Q99LU0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp1b1Q99LU0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp1b1Q99LU0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp1b1Q99LU0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp1b1Q99LU0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Gm45384-201ENSMUST00000210451 277 ntBASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Gm6983-201ENSMUST00000214912 628 ntBASIC12.27□□□□□ -0.45
Chmp1b1Q99LU0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms