Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm24845-201ENSMUST00000158034 109 ntBASIC13.64□□□□□ -0.23
Clp1Q99LI9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.64□□□□□ -0.23
Clp1Q99LI9 Gm7003-201ENSMUST00000195089 312 ntBASIC13.64□□□□□ -0.23
Clp1Q99LI9 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clp1Q99LI9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm12015-201ENSMUST00000117065 843 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm14832-201ENSMUST00000121289 322 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm6963-201ENSMUST00000147879 379 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm24749-201ENSMUST00000157838 343 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm16296-201ENSMUST00000159905 325 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm17040-202ENSMUST00000170597 889 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gzmn-202ENSMUST00000225535 989 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.63□□□□□ -0.23
Clp1Q99LI9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clp1Q99LI9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm12616-201ENSMUST00000118594 382 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm12266-201ENSMUST00000120311 962 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm12624-201ENSMUST00000177615 382 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm12621-201ENSMUST00000177760 382 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm12615-201ENSMUST00000177970 382 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm12622-201ENSMUST00000177975 382 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm12627-201ENSMUST00000178412 382 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm12625-201ENSMUST00000179122 382 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm12614-201ENSMUST00000179586 382 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm12613-201ENSMUST00000180323 382 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.62□□□□□ -0.23
Clp1Q99LI9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clp1Q99LI9 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms