Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15□□□□□ -0.01
Smc1bQ920F6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15□□□□□ -0.01
Smc1bQ920F6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smc1bQ920F6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Gm6023-201ENSMUST00000118217 606 ntBASIC14.99□□□□□ -0.01
Smc1bQ920F6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Gm38144-201ENSMUST00000192790 465 ntBASIC14.99□□□□□ -0.01
Smc1bQ920F6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.99□□□□□ -0.01
Smc1bQ920F6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smc1bQ920F6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Smc1bQ920F6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.98□□□□□ -0.01
Smc1bQ920F6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.98□□□□□ -0.01
Smc1bQ920F6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm11618-201ENSMUST00000117946 267 ntBASIC14.98□□□□□ -0.01
Smc1bQ920F6 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm38158-201ENSMUST00000194617 339 ntBASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm21769-201ENSMUST00000211922 111 ntBASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm7046-201ENSMUST00000221351 977 ntBASIC14.98□□□□□ -0.01
Smc1bQ920F6 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.98□□□□□ -0.01
Smc1bQ920F6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1bQ920F6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.97□□□□□ -0.01
Smc1bQ920F6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Smc1bQ920F6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1bQ920F6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Gm4986-201ENSMUST00000119731 549 ntBASIC14.97□□□□□ -0.01
Smc1bQ920F6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Gm22902-201ENSMUST00000158488 302 ntBASIC14.97□□□□□ -0.01
Smc1bQ920F6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.97□□□□□ -0.01
Smc1bQ920F6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.97□□□□□ -0.01
Smc1bQ920F6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Gm16505-201ENSMUST00000179981 232 ntBASIC14.97□□□□□ -0.01
Smc1bQ920F6 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.97□□□□□ -0.01
Smc1bQ920F6 Gm29608-201ENSMUST00000190444 463 ntBASIC14.97□□□□□ -0.01
Smc1bQ920F6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1bQ920F6 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.97□□□□□ -0.01
Smc1bQ920F6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1bQ920F6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms