Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha3Q91Y16 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdha3Q91Y16 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdha3Q91Y16 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Pcdha3Q91Y16 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdha3Q91Y16 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.58□□□□□ -0.23
Pcdha3Q91Y16 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdha3Q91Y16 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.58□□□□□ -0.23
Pcdha3Q91Y16 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdha3Q91Y16 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdha3Q91Y16 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Gm37922-201ENSMUST00000195596 455 ntBASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Gm44069-201ENSMUST00000204898 506 ntBASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Gm25857-201ENSMUST00000082788 129 ntBASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdha3Q91Y16 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha3Q91Y16 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Gm12203-201ENSMUST00000118235 598 ntBASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Gm12209-201ENSMUST00000120089 596 ntBASIC13.56□□□□□ -0.24
Pcdha3Q91Y16 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms