Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb20Q91XZ9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm12928-201ENSMUST00000117115 573 ntBASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm11411-201ENSMUST00000117951 719 ntBASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm12748-201ENSMUST00000120763 504 ntBASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm2495-201ENSMUST00000191160 466 ntBASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Ighv8-1-201ENSMUST00000194897 291 ntBASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm42438-201ENSMUST00000197832 974 ntBASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 AC107711.3-201ENSMUST00000228939 1035 ntBASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm42968-201ENSMUST00000198578 1372 ntBASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb20Q91XZ9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm13506-201ENSMUST00000120391 1083 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm14713-201ENSMUST00000122362 686 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm16571-201ENSMUST00000159112 291 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm27892-201ENSMUST00000185017 106 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm29354-201ENSMUST00000187613 696 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm37154-201ENSMUST00000192266 1290 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm18187-201ENSMUST00000196476 984 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm20274-201ENSMUST00000206967 584 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 AC164629.1-201ENSMUST00000220250 1113 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 AC183092.2-201ENSMUST00000225542 1153 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb20Q91XZ9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms