Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhga3Q91XY5 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Mir7221-201ENSMUST00000184009 72 ntBASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Gm44397-201ENSMUST00000195950 113 ntBASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhga3Q91XY5 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdhga3Q91XY5 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdhga3Q91XY5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdhga3Q91XY5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdhga3Q91XY5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdhga3Q91XY5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdhga3Q91XY5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gm15429-201ENSMUST00000151268 798 ntBASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms