Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim60Q8VI40 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.42□□□□□ -0.26
Trim60Q8VI40 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.42□□□□□ -0.26
Trim60Q8VI40 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.42□□□□□ -0.26
Trim60Q8VI40 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trim60Q8VI40 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.41□□□□□ -0.26
Trim60Q8VI40 Gm11978-201ENSMUST00000122315 466 ntBASIC13.41□□□□□ -0.26
Trim60Q8VI40 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.41□□□□□ -0.26
Trim60Q8VI40 Gm44397-201ENSMUST00000195950 113 ntBASIC13.41□□□□□ -0.26
Trim60Q8VI40 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Gm6983-201ENSMUST00000214912 628 ntBASIC13.41□□□□□ -0.26
Trim60Q8VI40 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.41□□□□□ -0.26
Trim60Q8VI40 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.41□□□□□ -0.26
Trim60Q8VI40 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim60Q8VI40 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.4□□□□□ -0.26
Trim60Q8VI40 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.4□□□□□ -0.26
Trim60Q8VI40 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.4□□□□□ -0.26
Trim60Q8VI40 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.4□□□□□ -0.26
Trim60Q8VI40 Mir7023-201ENSMUST00000185093 64 ntBASIC13.4□□□□□ -0.26
Trim60Q8VI40 Gm42612-201ENSMUST00000197986 623 ntBASIC13.4□□□□□ -0.26
Trim60Q8VI40 Gm43170-201ENSMUST00000199827 612 ntBASIC13.4□□□□□ -0.26
Trim60Q8VI40 Gm7730-201ENSMUST00000212486 454 ntBASIC13.4□□□□□ -0.26
Trim60Q8VI40 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.4□□□□□ -0.26
Trim60Q8VI40 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Itm2b-204ENSMUST00000228637 783 ntBASIC13.4□□□□□ -0.26
Trim60Q8VI40 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim60Q8VI40 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms