Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Vps39Q8R5L3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13□□□□□ -0.33
Vps39Q8R5L3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Gm16202-201ENSMUST00000117532 544 ntBASIC13□□□□□ -0.33
Vps39Q8R5L3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Gm15823-201ENSMUST00000064305 670 ntBASIC13□□□□□ -0.33
Vps39Q8R5L3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vps39Q8R5L3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vps39Q8R5L3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.99□□□□□ -0.33
Vps39Q8R5L3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.99□□□□□ -0.33
Vps39Q8R5L3 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.99□□□□□ -0.33
Vps39Q8R5L3 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps39Q8R5L3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps39Q8R5L3 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.98□□□□□ -0.33
Vps39Q8R5L3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vps39Q8R5L3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Vps39Q8R5L3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps39Q8R5L3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps39Q8R5L3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps39Q8R5L3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps39Q8R5L3 Gm11978-201ENSMUST00000122315 466 ntBASIC12.98□□□□□ -0.33
Vps39Q8R5L3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps39Q8R5L3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms