Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Gm11941-201ENSMUST00000119904 610 ntBASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Gm21811-201ENSMUST00000096485 930 ntBASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Gm5525-201ENSMUST00000190438 1312 ntBASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Gm14644-201ENSMUST00000116671 647 ntBASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx54Q8K4L0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx54Q8K4L0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx54Q8K4L0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ddx54Q8K4L0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ddx54Q8K4L0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Gm12501-201ENSMUST00000119163 529 ntBASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Gm23153-201ENSMUST00000175323 313 ntBASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Gm3671-201ENSMUST00000182463 1007 ntBASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx54Q8K4L0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx54Q8K4L0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms