Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Mir6998-201ENSMUST00000183343 64 ntBASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Mir7076-201ENSMUST00000183519 74 ntBASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Gm19931-201ENSMUST00000198920 368 ntBASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Gm3793-201ENSMUST00000204973 672 ntBASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Gm6905-201ENSMUST00000205729 511 ntBASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col23a1Q8K4G2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Gm23218-201ENSMUST00000158124 276 ntBASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col23a1Q8K4G2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Gm11989-201ENSMUST00000117240 672 ntBASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Gm11362-201ENSMUST00000118838 850 ntBASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Gm2517-201ENSMUST00000215651 348 ntBASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 AC154184.3-201ENSMUST00000225620 1090 ntBASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Gm9996-201ENSMUST00000070359 913 ntBASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.54■□□□□ 0.08
Col23a1Q8K4G2 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.53■□□□□ 0.08
Col23a1Q8K4G2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms