Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Gm12291-201ENSMUST00000121627 311 ntBASIC14.62□□□□□ -0.07
Syne4Q8CII8 Gm6963-201ENSMUST00000147879 379 ntBASIC14.62□□□□□ -0.07
Syne4Q8CII8 Gm23699-201ENSMUST00000158835 135 ntBASIC14.62□□□□□ -0.07
Syne4Q8CII8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Gm7467-201ENSMUST00000185173 652 ntBASIC14.62□□□□□ -0.07
Syne4Q8CII8 Gm19931-201ENSMUST00000198920 368 ntBASIC14.62□□□□□ -0.07
Syne4Q8CII8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.62□□□□□ -0.07
Syne4Q8CII8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Syne4Q8CII8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.61□□□□□ -0.07
Syne4Q8CII8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.61□□□□□ -0.07
Syne4Q8CII8 Gm14999-201ENSMUST00000121039 624 ntBASIC14.61□□□□□ -0.07
Syne4Q8CII8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Gm24845-201ENSMUST00000158034 109 ntBASIC14.61□□□□□ -0.07
Syne4Q8CII8 Gm8018-201ENSMUST00000173536 789 ntBASIC14.61□□□□□ -0.07
Syne4Q8CII8 Gm9211-201ENSMUST00000182882 975 ntBASIC14.61□□□□□ -0.07
Syne4Q8CII8 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Gm17812-201ENSMUST00000204935 318 ntBASIC14.61□□□□□ -0.07
Syne4Q8CII8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Spcs1-203ENSMUST00000226374 592 ntBASIC14.61□□□□□ -0.07
Syne4Q8CII8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Syne4Q8CII8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.6□□□□□ -0.07
Syne4Q8CII8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Gm32999-201ENSMUST00000192693 562 ntBASIC14.6□□□□□ -0.07
Syne4Q8CII8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Syne4Q8CII8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms