Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Gm44397-201ENSMUST00000195950 113 ntBASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Gm6266-201ENSMUST00000203844 806 ntBASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Gm6007-201ENSMUST00000208170 823 ntBASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vcpip1Q8CDG3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vcpip1Q8CDG3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Vcpip1Q8CDG3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.96□□□□□ -0.18
Vcpip1Q8CDG3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vcpip1Q8CDG3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vcpip1Q8CDG3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vcpip1Q8CDG3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Vcpip1Q8CDG3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Gm11918-201ENSMUST00000121660 179 ntBASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Gm6983-201ENSMUST00000214912 628 ntBASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vcpip1Q8CDG3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Gm18624-201ENSMUST00000220966 658 ntBASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms