Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm9949Q8C9F4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm9949Q8C9F4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Gm15806-201ENSMUST00000120696 955 ntBASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Mir1894-201ENSMUST00000122802 81 ntBASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm9949Q8C9F4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms