Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Gm13223-201ENSMUST00000118609 747 ntBASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Mir1897-201ENSMUST00000122581 272 ntBASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Gm38294-201ENSMUST00000192831 381 ntBASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Gm44344-201ENSMUST00000200287 129 ntBASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Daam2-202ENSMUST00000224595 1926 ntBASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tsen54Q8C2A2 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Gm27306-201ENSMUST00000183970 107 ntBASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Gm27680-201ENSMUST00000184192 160 ntBASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.87□□□□□ -0.67
Tsen54Q8C2A2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tsen54Q8C2A2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms